Full list of publications

Dos Santos, F and Andras, PE and Lam, KP (2017) Towards an Accurate Identification of Pyloric Neuron Activity with VSDi. In: 26th International Conference on Artificial Neural Networks, 11-15 September 2017, Alghero, Sardinia, Italy

Scardapane, S and Butcher, JB and Bianchi, F and Malik, ZK (2017) Advances in Biologically Inspired Reservoir Computing. Cognitive Computation. ISSN 1866-9956 Item availability may be restricted.

Day, CR and Jabbar, SI and Heinz, N and Chadwick, EK  (2016) Using Convolutional Neural Network for Edge Detection in Musculoskeletal Ultrasound Images.  In: International Joint Conference on Neural Networks, 25-29 Jul 2016, Vancouver.  

Steyn, JS and Andras, PE  (2016) Analysis of the dynamics of temporal relationships of neural activities using optical imaging data.  Journal of Computational Neuroscience. ISSN 1573-6873

Fisher, JM and Hammerla, NY and Rochester, L and Andras, P and Walker, RW  (2016) Body-Worn Sensors in Parkinson's Disease: Evaluating Their Acceptability to Patients. Telemedicine and e-Health, 22 (1).  63 -69.  ISSN 1556-3669

Hammerla, N, Fisher, J, Andras, P, Rochester, L, Walker, R, Ploetz, T (2015). PD disease state assessment in naturalistic environments using deep learning. Accepted for publication in the Proceedings of the AAAI – 2015.

Chadwick EK, Blana D, Kirsch RF, van den Bogert AJ. 2014. Real-Time Simulation of Three-Dimensional Shoulder Girdle and Arm Dynamics. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, vol. 61(7), 1947-1956.

Cutti AG and Chadwick EK. 2014. Shoulder biomechanics and the success of translational research. MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING, vol. 52(3), 205-210.

Bai, D, Benniston, AC, Clift, S, Baisch, U, Steyn, J, Everitt, N, Andras, P (2014). Low molecular weight Neutral Boron Dipyrromethene (Bodipy) dyads for fluorescence-based neural imaging. Journal of Molecular Structure, 1065-1066: 10-15.

Smith WA, Lam K-P, Dempsey KP, Mazzocchi-Jones D, Richardson JB, Yang Y. 2014. Label free cell tracking in 3-D tissue engineering constructs with high resolution imaging. DYNAMICS AND FLUCTUATIONS IN BIOMEDICAL PHOTONICS XI (vol. 8942).

Dempsey KP, Richardson JB, Lam KP. 2014. On measuring cell confluence in phase contrast microscopy.IMAGING, MANIPULATION, AND ANALYSIS OF BIOMOLECULES, CELLS, AND TISSUES XII (vol. 8947)

Marchi J, Blana D, Chadwick EK. 2014. Glenohumeral stability during a hand-positioning task in previously injured shoulders. Med Biol Eng Comput, vol. 52(3), 251-256.

Bolsterlee B, Veeger DH, Chadwick EK. 2013. Clinical applications of musculoskeletal modelling for the shoulder and upper limb. Med Biol Eng Comput, vol. 51(9), 953-963. 

Blana D, Hincapie JG, Chadwick EK, Kirsch RF. 2013. Selection of muscle and nerve-cuff electrodes for neuroprostheses using customizable musculoskeletal model. J Rehabil Res Dev, vol. 50(3), 395-408.

Lam K, Smith WA, Collins DJ, Richardson JB. 2013. On 2.5D Surface Reconstruction of Cell Cultures. In G. Ramponi, S. Loncaric & A. Carini (Eds.). University of Zagreb, Croatia: IEEE Signal Processing Society.

Lam K and Collins DJ. 2013. FACE: Fractal Analysis in Cell Engineering. In K. Elleithy (Ed.). Innovations and Advances in Computer, Information, Systems Sciences, and Engineering Lecture Notes in Electrical Engineering Volume 152, 2013, pp 1151-1164 (vol. 152, pp. 1151-1164). USA: Springer New York.

Lam KP, Dempsy KP, Smith WA, Wright KT, Masri WE, Richardson JB, IEEE. 2013. A Computational Approach to Quantifying Axon Regeneration in the Presence of Mesenchymal Stem Cells (MSCs). 2013 6TH INTERNATIONAL IEEE/EMBS CONFERENCE ON NEURAL ENGINEERING (NER) (pp. 1541-1544)

Städele, C, Andras, P, Stein, W (2012). Simultaneous measurement of membrane potential changes in multiple pattern generating neurons using voltage sensitive dye imaging. Journal of Neuroscience Methods, 203: 78-88.

Kyriacou T. (2012) Using an Evolutionary Algorithm to Determine the Parameters of a Biologically Inspired Model of Head Direction Cells. Journal of Computational Neuroscience, 32:281-295.

Lam K, Smith, WA, Collins, DJ. 2012. FORTHCOMING: Scalable 2-1/2D Reconstruction of Cell Objects.International Journal on Industrial Electronics, Technology and Automation

Hidalgo-Bastida LA, Thirunavukkarasu S, Griffiths S, Cartmell SH, Naire S. 2012. Modeling and design of optimal flow perfusion bioreactors for tissue engineering applications. BIOTECHNOLOGY AND BIOENGINEERING, vol. 109(4), 1095-1099.

Lutianov M, Naire S, Roberts S, Kuiper JH. 2011. A mathematical model of cartilage regeneration after cell therapy. J Theor Biol, vol. 289, 136-150

Nikooyan AA, Veeger HE, Chadwick EK, Praagman M, Helm FC. 2011. Development of a comprehensive musculoskeletal model of the shoulder and elbow. Med Biol Eng Comput, vol. 49(12), 1425-1435.

Chadwick EK, Blana D, Simeral JD, Lambrecht J, Kim SP, Cornwell AS, Taylor DM, Hochberg LR, Donoghue JP, Kirsch RF. 2011. Continuous neuronal ensemble control of simulated arm reaching by a human with tetraplegia.J Neural Eng, vol. 8(3), 034003

Stein, W, Städele, C, Andras, P (2011). Single-sweep voltage sensitive dye imaging of interacting identified neurons. Journal of Neuroscience Methods, 194:224-234.

Stein, W, Städele, C, Andras, P (2011). Optical imaging of neurons in the crab stomatogastric ganglion with voltage-sensitive dyes. Journal of Visualized Experiments, doi: 10.3791/2567.

Luo, JW, Mak, T, Yu, B, Andras, P, Yakovlev, A (2011). Towards neuro-silicon interface using reconfigurable dynamic clamping. In proceedings of the Conference of the IEEE Engineering in Medicine and Biology Society – EMBC’11, pp.6389-6392.

Hammerla, N, Plötz, T, Andras, P, Olivier, P (2011). Assessing motor performance with PCA. In Proceedings of the International Workshop on Frontiers in Activity Recognition using Pervasive Sensing.

van den Bogert AJ, Blana D, Heinrich D. 2011. Implicit methods for efficient musculoskeletal simulation and optimal control. Procedia IUTAM, vol. 2(2011), 297-316.

Sule-Suso J, Lam KP, Bhana R, Adab F, Sargeant S, Collins D, Patel A, Moloney A. 2011. Three-Dimensional Imaging for Radiotherapy Planning in Prostate Cancer. EUROPEAN JOURNAL OF CANCER (vol. 47, p. S194)

Pijanka J, Sockalingum GD, Kohler A, Yang Y, Draux F, Parkes G, Lam KP, Collins D, Dumas P, Sandt C, van Pittius DG, Douce G, Manfait M, Untereiner V, Sulé-Suso J. 2010. Synchrotron-based FTIR spectra of stained single cells. Towards a clinical application in pathology. Lab Invest, vol. 90(5), 797-807

Praagman M, Chadwick EK, van der Helm FC, Veeger HE. 2010. The effect of elbow angle and external moment on load sharing of elbow muscles. J Electromyogr Kinesiol, vol. 20(5), 912-922.

Stein, W, Andras, P (2010). Light-induced effects of a fluorescent voltage-sensitive dye on neuronal activity in the crab stomatogastric ganglion. Journal of Neuroscience Methods, 188:290-294.

Blana D, Kirsch RF, Chadwick EK. 2009. Combined feedforward and feedback control of a redundant, nonlinear, dynamic musculoskeletal system. Med Biol Eng Comput, vol. 47(5), 533-542.

Chadwick EK, Blana D, van den Bogert AJ, Kirsch RF. 2009. A real-time, 3-D musculoskeletal model for dynamic simulation of arm movements. IEEE Trans Biomed Eng, vol. 56(4), 941-948.

Andras, P (2009). Molecular neuroimaging – A proposal for a novel approach to high resolution recording of neural activity in nervous systems. Medical Hypotheses, 73: 876-882.

Whittaker RJ, Booth R, Dyson R, Bailey C, Parsons Chini L, Naire S, Payvandi S, Rong Z, Woollard H, Cummings LJ, Waters SL, Mawasse L, Chaudhuri JB, Ellis MJ, Michael V, Kuiper NJ, Cartmell S. 2009. Mathematical modelling of fibre-enhanced perfusion inside a tissue-engineering bioreactor. J Theor Biol, vol. 256(4), 533-546.

Naire S. 2009. Dynamics of voluntary cough maneuvers: a theoretical model. J Biomech Eng, vol. 131(1), 011010.

Hincapie JG, Blana D, Chadwick EK, Kirsch RF. 2008. Musculoskeletal model-guided, customizable selection of shoulder and elbow muscles for a C5 SCI neuroprosthesis. IEEE Trans Neural Syst Rehabil Eng, vol. 16(3), 255-263

Gatti CJ, Dickerson CR, Chadwick EK, Mell AG, Hughes RE. 2007. Comparison of model-predicted and measured moment arms for the rotator cuff muscles. Clin Biomech (Bristol, Avon), vol. 22(6), 639-644.

Iglesias R, Kyriacou T, Nehmzow U, Billings SA. 2007. Task Identification and Characterisation in Mobile Robotics through Non-Linear Modelling. Robotics and Autonomous Systems, vol. 55, 267-275.

Nehmzow U, Akanyeti O, Weinrich C, Kyriacou T, Billings SA. 2007. Robot programming by demonstration through system identification. Intelligent Robots and Systems, 2007. IROS 2007. IEEE/RSJ International Conference on, 801–806. 

Kaiser M, Martin R, Andras P, Young MP (2007). Simulation of structural robustness of cortical networks. European Journal of Neuroscience, 25 (10): 3185-3192.

Wennekers, T, Ay, N, Andras, P (2007). High resolution multiple-unit EEG in cat neocortex reveals large spatio-temporal stochastic interactions. BioSystems, 89: 190-197.

Andras, P and Wennekers, T (2007). Cortical activity pattern computation. BioSystems 87: 179-185.

Andras, P & Lycett, S (2007). An advantage of chaotic neural dynamics. In Proceedings of IJCNN’2007, pp.1417-1422.

Charlton, BG & Andras, P (2007). Complex biological memory conceptualized as an abstract communication system –human long term memories grow in complexity during sleep and undergo selection while awake. In: Kozma, R & Perlovsky, L (Eds.) Neurodynamics of Cognition and Consciousness, Springer, pp.325-340.

Nehmzow U, Iglesias R, Kyriacou T, Billings S. 2006. Robot Learning Through Task Identification. Robotics and Autonomous Systems, vol. 54, 66-778.

Kyriacou T, Akanyeti O, Nehmzow U, Iglesias R, Billings S. 2006. Visual task identification using polynomial models. Proc. Towards Autonomous Robotic Systems, Taros

Andras, P (2006). Extraction of an activity pattern language from EEG data. Neurocomputing, 69: 1313-1316.

Andras, P (2006). The language of cortical dynamics. LNBI 4216, Berthold, MR, Glen, R & Fischer I (eds.) CompLife 2006, Springer-Verlag, pp.247-256.

Veeger HE, Magermans DJ, Nagels J, Chadwick EK, van der Helm FC. 2006. A kinematical analysis of the shoulder after arthroplasty during a hair combing task. Clin Biomech (Bristol, Avon), vol. 21 Suppl 1, S39-S44.

van Drongelen S, van der Woude LH, Janssen TW, Angenot EL, Chadwick EK, Veeger HE. 2006. Glenohumeral joint loading in tetraplegia during weight relief lifting: a simulation study. Clin Biomech (Bristol, Avon), vol. 21(2), 128-137.

Praagman M, Chadwick EK, van der Helm FC, Veeger HE. 2006. The relationship between two different mechanical cost functions and muscle oxygen consumption. J Biomech, vol. 39(4), 758-765.

Magermans DJ, Chadwick EK, Veeger HE, van der Helm FC. 2005. Requirements for upper extremity motions during activities of daily living. Clin Biomech (Bristol, Avon), vol. 20(6), 591-599.

van Drongelen S, van der Woude LH, Janssen TW, Angenot EL, Chadwick EK, Veeger DH. 2005. Glenohumeral contact forces and muscle forces evaluated in wheelchair-related activities of daily living in able-bodied subjects versus subjects with paraplegia and tetraplegia. Arch Phys Med Rehabil, vol. 86(7), 1434-1440

Naire S and Jensen OE. 2005. Epithelial cell deformation during surfactant-mediated airway reopening: a theoretical model. J Appl Physiol (1985), vol. 99(2), 458-471

Kyriacou T, Nehmzow U, Iglesias R, Billings S. 2005. Task Characterisation and Cross-Platform Programming Through System Identification. Advanced Robotic Systems, vol. 2, 317-324.

Kyriacou T, Bugmann G, Lauria S. 2005. Vision-Based Urban Navigation Procedures for Verbally Instructed Robots. Robotics and Autonomous Systems (RAS), vol. 51, 69–80.

Andras, P (2005). Pattern computation in neural communication systems. Biological Cybernetics, 92: 452-460.

Andras, P (2005). Neural activity pattern systems. Neurocomputing, 65-66: 531-536.

Andras, P and Wennekers, T (2005). Cortical activity pattern computation. In Proceedings of IPCAT’2005, pp.153-161.

Chadwick EK, van Noort A, van der Helm FC. 2004. Biomechanical analysis of scapular neck malunion--a simulation study. Clin Biomech (Bristol, Avon), vol. 19(9), 906-912.

Walker CA, Gray TGF, Nicol AC, Chadwick EKJ. 2004. Evaluation of test regimes for stab-resistant body armour.PROCEEDINGS OF THE INSTITUTION OF MECHANICAL ENGINEERS PART L-JOURNAL OF MATERIALS-DESIGN AND APPLICATIONS, vol. 218(L4), 355-361.

Magermans DJ, Chadwick EK, Veeger HE, van der Helm FC, Rozing PM. 2004. Biomechanical analysis of tendon transfers for massive rotator cuff tears. Clin Biomech (Bristol, Avon), vol. 19(4), 350-357.

Magermans DJ, Chadwick EK, Veeger HE, Rozing PM, van der Helm FC. 2004. Effectiveness of tendon transfers for massive rotator cuff tears: a simulation study. Clin Biomech (Bristol, Avon), vol. 19(2), 116-122.

Andras, P. (2004). Pattern Languages: A New Paradigm for Neurocomputation. Neurocomputing, vol.58-60, pp.223-228.

Naire S and Jensen OE. 2003. An asymptotic model of unsteady airway reopening. J Biomech Eng, vol. 125(6), 823-831.

Veeger HE, van der Helm FC, Chadwick EK, Magermans D. 2003. Toward standardized procedures for recording and describing 3-D shoulder movements. Behav Res Methods Instrum Comput, vol. 35(3), 440-446.

Magermans DJ, Smits NC, Chadwick EK, Veeger D, van der Helm FC, Rozing PM. 2003. Discriminating factors for functional outcome after shoulder arthroplasty. A critical review of the literature. Acta Orthop Belg, vol. 69(2), 127-136.

Praagman M, Veeger HE, Chadwick EK, Colier WN, van der Helm FC. 2003. Muscle oxygen consumption, determined by NIRS, in relation to external force and EMG. J Biomech, vol. 36(7), 905-912.

Andras, P. (2003). A Model for Emergent Complex Order in Small Neural Networks. Journal of Integrative Neuroscience, vol.2., no.1., pp. 55-70.

Andras, P. (2003) Comparing Neurophysiological Measurements of Simulated and Real Brains. Neurocomputing, vol. 52-54., pp.677-682.

Andras, P. (2003) Understanding Neural Computation in Terms of Pattern Languages. In Proceedings of the International Joint Conference on Neural Networks 2003, pp. 1385-1390.

Andras, P. (2002). Computation with Chaotic Patterns. Neurocomputing , vol.44-46., pp.263-268.

András, P., Panzeri, S. and Young, M.P. (2002). Towards Statistically Valid Population Decoding Models. Neurocomputing, vol.44-46., pp.269-274.

Andras, P., Postma, E., and Van den Herik, J. (2001). Natural Dynamics and Neural Networks. Journal of Intelligent Systems, vol.11, no.3, pp.173-201.

Andras, P. (2001) The Sierpinski brain. In Proceedings of the International Joint Conference on Neural Networks 2001, vol.1., pp.654-659.

Chadwick EK and Nicol AC. 2001. A novel force transducer for the measurement of grip force. J Biomech, vol. 34(1), 125-128.

Andras P. (2001) The Role of Brain Chaos. In: Wermter, S., Austin, J. & Willshaw, D. (Eds.) Emerging Neural Architectures based on Neuroscience, Springer-Verlag, Heidelberg, pp.296-310.

Lauria S, Bugmann G, Kyriacou T, Bos J, Klein E. 2001. Training Personal Robots Using Natural Language Instruction. IEEE Intelligent Systems, vol. 16, 38-45.

Magermans DJ, Smits NCMA, Chadwick EKJ, Veeger DJ, van der Helm FCT. 2001. Functional evaluation of the shoulder. PROCEEDINGS OF THE THIRD CONFERENCE OF THE INTERNATIONAL SHOULDER GROUP (pp. 101-103).

Chadwick EKJ, van Noort A, van der Helm FCT, Slaa RLT, Marti RK, van der Werken C. 2001. Modelling shoulder function and strength after scapular neck fracture. PROCEEDINGS OF THE THIRD CONFERENCE OF THE INTERNATIONAL SHOULDER GROUP (pp. 29-32).

Chadwick EK, Nicol AC, Floyd S, Gray TG. 2000. A telemetry-based device to determine the force-displacement behaviour of materials in high impact loading situations. J Biomech, vol. 33(3), 361-365.

Chadwick EK and Nicol AC. 2000. Elbow and wrist joint contact forces during occupational pick and place activities. J Biomech, vol. 33(5), 591-600.

Chadwick EK, Nicol AC, Lane JV, Gray TG. 1999. Biomechanics of knife stab attacks. Forensic Sci Int, vol. 105(1), 35-44.

Andras, P., Postma, E., van den Herik, J. (1999) Dealing with Environmental Dynamics. In Proceedings of BNAIC’99, Maastricht, IKAT, pp.211-218.